Monday, August 22, 2011

Are cancers newly evolved species?

ScienceDaily (July 27, 2011) — Cancer patients may view their tumors as parasites taking over their bodies, but this is more than a metaphor for Peter Duesberg, a molecular and cell biology professor at the University of California, Berkeley.

See Also:Health & MedicineCancerBrain TumorLung CancerPlants & AnimalsGeneticsEvolutionary BiologyBiologyStrange ScienceReferenceMetastasisTumor suppressor genePap smearTumor

Cancerous tumors are parasitic organisms, he said. Each one is a new species that, like most parasites, depends on its host for food, but otherwise operates independently and often to the detriment of its host.

In a paper published in the July 1 issue of the journal Cell Cycle, Duesberg and UC Berkeley colleagues describe their theory that carcinogenesis -- the generation of cancer -- is just another form of speciation, the evolution of new species.

A molecular biologists has long believed that cancer results from chromosome disruption rather than a handful of gene mutations, which is the dominant theory today. That idea has led him to propose that cancers have actually evolved new chromosomal karyotypes that qualify them as autonomous species, akin to parasites and much different from their human hosts.

"Cancer is comparable to a bacterial level of complexity, but still autonomous, that is, it doesn't depend on other cells for survival; it doesn't follow orders like other cells in the body, and it can grow where, when and how it likes," said Duesberg. "That's what species are all about."

This novel view of cancer could yield new insights into the growth and metastasis of cancer, Duesberg said, and perhaps new approaches to therapy or new drug targets. In addition, because the disrupted chromosomes of newly evolved cancers are visible in a microscope, it may be possible to detect cancers earlier, much as today's Pap smear relies on changes in the shapes of cervical cells as an indication of chromosomal problems that could lead to cervical cancer.

Carcinogenesis and evolution

The idea that cancer formation is akin to the evolution of a new species is not new, with various biologists hinting at it in the late 20th century. Evolutionary biologist Julian S. Huxley wrote in 1956 that "Once the neoplastic process has crossed the threshold of autonomy, the resultant tumor can be logically regarded as a new biologic species …."

Last year, Dr. Mark Vincent of the London Regional Cancer Program and University of Western Ontario argued in the journal Evolution that carcinogenesis and the clonal evolution of cancer cells are speciation events in the strict Darwinian sense.

The evolution of cancer "seems to be different from the evolution of a grasshopper, for instance, in part because the cancer genome is not a stable genome like that of other species. The challenging question is, what has it become?" Vincent said in an interview. "Duesberg's argument from karyotype is different from my argument from the definition of a species, but it is consistent."

Vincent noted that there are three known transmissible cancers, including devil facial tumor disease, a "parasitic cancer" that attacks and kills Tasmanian devils. It is transmitted from one animal to another by a whole cancer cell. A similar parasitic cancer, canine transmissible venereal tumor, is transmitted between dogs via a single cancer cell that has a genome dating from the time when dogs were first domesticated. A third transmissible cancer was found in hamsters.

"Cancer has become a successful parasite," Vincent said.

Mutation theory vs. aneuploidy

Duesbeg's arguments derive from his controversial proposal that the reigning theory of cancer -- that tumors begin when a handful of mutated genes send a cell into uncontrolled growth -- is wrong. He argues, instead, that carcinogenesis is initiated by a disruption of the chromosomes, which leads to duplicates, deletions, breaks and other chromosomal damage that alter the balance of tens of thousands of genes. The result is a cell with totally new traits -- that is, a new phenotype.

"I think Duesberg is correct by criticizing mutation theory, which sustains a billion-dollar drug industry focused on blocking these mutations," said Vincent, a medical oncologist. "Yet very, very few cancers have been cured by targeted drug therapy, and even if a drug helps a patient survive six or nine more months, cancer cells often find a way around it."

Chromosomal disruption, called aneuploidy, is known to cause disease. Down syndrome, for example, is caused by a third copy of chromosome 21, one of the 23 pairs of human chromosomes. All cancer cells are aneuploid, Duesberg said, though proponents of the mutation theory of cancer argue that this is a consequence of cancer, not the cause.

Key to Duesberg's theory is that some initial chromosomal mutation -- perhaps impairing the machinery that duplicates or segregates chromosomes in preparation for cell division -- screws up a cell's chromosomes, breaking some or making extra copies of others. Normally this would be a death sentence for a cell, but in rare cases, he said, such disrupted chromosomes might be able to divide further, perpetuating and compounding the damage. Over decades, continued cell division would produce many unviable cells as well as a few still able to divide autonomously and seed cancer.

Duesberg asserts that cancers are new species because those viable enough to continue dividing develop relatively stable chromosome patterns, called karyotypes, distinct from the chromosome pattern of their human host. While all known organisms today have stable karyotypes, with all cells containing precisely two or four copies of each chromosome, cancers exhibit a more flexible and unpredictable karyotype, including not only intact chromosomes from the host, but also partial, truncated and mere stumps of chromosomes.

"If humans changed their karyotype -- the number and arrangement of chromosomes -- we would either die or be unable to mate, or in very rare cases become another species," Duesberg said. But cancer cells just divide and make more of themselves. They don't have to worry about reproduction, which is sensitive to chromosomal balance. In fact, as long as the genes for mitosis are still intact, a cancer cell can survive with many disrupted and unbalanced chromosomes, such as those found in an aneuploid cell, he said.

The karyotype does change as a cancer cell divides, because the chromosomes are disrupted and thus don't copy perfectly. But the karyotype is "only flexible within a certain margin," Duesberg said. "Within these margins it remains stable, despite its flexibility."

Karyographs display karyotype variability

Duesberg and his colleagues developed karyographs as a way to display the aneuploid nature of a cell's karyotype and its stability across numerous cell cultures. Using these karyographs, he and his colleagues analyzed several cancers, clearly demonstrating that the karyotype is amazingly similar in all cells of a specific cancer line, yet totally different from the karyotypes of other cancers and even the same type of cancer from a different patient.

HeLa cells are a perfect example. Perhaps the most famous cancer cell line in history, HeLa cells were obtained in 1951 from a cervical cancer that eventually killed a young black woman named Henrietta Lacks. The 60-year-old cell line derived from her cancer has a relatively stable karyotype that keeps it alive through division after division.

"Once a cell has crossed that barrier of autonomy, it's a new species," Duesberg said. "HeLa cells have evolved in the laboratory and are now even more stable than they probably were when they first arose."

The individualized karyotypes of cancers resemble the distinct karyotypes of different species,, Duesberg said. While biologists have not characterized the karyotypes of most species, no two species are known that have the same number and arrangement of chromosomes, including those of, for example, gorillas and humans, who share 99 percent of their genes.

Duesberg argues that his speciation theory explains cancer's autonomy, immortality and flexible, but relatively stable, karyotype. It also explains the long latency period between initial aneuploidization and full blown cancer, because there is such a low probability of evolving an autonomous karyotype.

"You start with a chromosomal mutation, that is, aneuploidy perhaps from X-rays or cigarettes or radiation, that destabilizes and eventually changes your karyotype or renders it non-viable," he said. "The rare viable aneuploidies of cancers are, in effect, the karyotypes of new species."

Duesberg hopes that the carcinogenesis-equals-speciation theory will spur new approaches to diagnosing and treating cancer. Vincent, for example, suspects that cancers are operating right at the edge of survivability, maintaining genomic flexibility while retaining the ability to divide forever. Driving them to evolve even faster, he said, "might push them over the edge."

Duesberg's colleagues are postdoctoral fellow Daniele Mandrioli and research associate Amanda McCormack of UC Berkeley and graduate student Joshua M. Nicholson in the Department of Biological Sciences at Virginia Polytechnic Institute.

Duesberg's research is funded by the Abraham J. and Phyllis Katz Foundation, philanthropists Dr. Christian Fiala, Rajeev and Christine Joshi, Robert Leppo and Peter Rozsa of the Taubert Memorial Foundation, other private sources and the Forschungsfonds der Fakultät für Klinische Medizin Mannheim der Universität Heidelberg.

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Treating obesity via brain glucose sensing

ScienceDaily (July 26, 2011) — The past two decades have witnessed an epidemic spread of obesity-related diseases in Western countries. Elucidating the biological mechanism that links overnutrition to obesity could prove crucial in reducing obesity levels. In the July 26 issue of PLoS Biology, Dr. Dongsheng Cai and his research team at Albert Einstein College of Medicine describe a pathway that directs the brain to sense the body's glucose dynamics, and they find that a defect of this glucose sensing process contributes to the development of obesity and related disease. Importantly, the team also found that correction of this defect can normalize the whole-body energy balance and treat obesity.See Also:Health & MedicineObesityDiet and Weight LossFitnessMind & BrainDieting and Weight ControlNutrition ResearchNeuroscienceReferenceAppetiteBlood sugarSkeletal muscleDiabetes mellitus type 2

The hypothalamus in the brain plays a key role in controlling energy and body weight balance. To maintain balance between energy intake and energy expenditure, the hypothalamus constantly gauges the whole-body's energy levels by sampling circulating hormones (e.g. insulin and leptin) as well as nutrients (e.g., glucose). Although we know quite a bit about the hormonal pathways in the hypothalamic regulation of feeding, the mechanisms for hypothalamic nutrient sensing are much less clear. Moreover, a causal link between a nutrient sensing defect and obesity remains to be established. The team led by Dr. Cai discovered a novel role of a protein complex, hypoxia-inducible factor (HIF), in hypothalamic glucose sensing and whole-body energy balance in mice.

HIF is a nuclear transcription factor which induces hypoxia response. When tissue oxygen level is low, HIF is activated to promote cellular metabolic adaption and survival. Recent research has appreciated the involvement of HIF in the metabolism of tumor cells. "However, an intriguing but unexplored question is whether HIF can be important for the regulation of whole-organism metabolism, and if so, which tissue and cells are responsible." says Cai, who is an expert in neuroendocrinology and metabolism.

Cai and his group examined HIF in the hypothalamus and, surprisingly, found that it can be activated by glucose and that this regulation was associated with appetite control in mice. In identifying the cellular and molecular basis, the team found that in response to glucose, HIF acts in a unique group of hypothalamic nutrient-sensing neurons to induce expression of POMC gene -- a gene which has been known to play a key part in hypothalamic control of feeding and body weight. Most excitingly, the team demonstrated the therapeutic potential of targeting hypothalamic HIF to control obesity. By enhancing the hypothalamic HIF activity via gene delivery, mice become resistant to obesity despite the condition of nutritional excess.

"It was an exciting discovery," explains Cai, "Our study is the first to show that beyond its classical oxygen-sensing function in many cells, HIF in the hypothalamic neurons can sense glucose to control the whole-body balance of energy intake and expenditure which is critical for body weight homeostasis." Overall, this study reveals a crucial role for neuronal HIF in bridging the brain's glucose sensing with the brain's regulation of body weight and metabolic physiology. These findings also highlight a potential implication for developing neuronal HIF activators in treating and preventing obesity and related diseases.

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Researchers capture breakthrough data on cervical spine injuries

ScienceDaily (July 26, 2011) — A high school football player's broken neck -- from which he's recovered -- has yielded breakthrough biomechanical data on cervical spine injuries that could ultimately affect safety and equipment standards for athletes.See Also:Health & MedicineBone and SpineCervical CancerAccident and TraumaSports MedicineStaying HealthyWorkplace HealthReferenceHead injuryPhysical traumaSpinal cordTinnitus

University of New Hampshire associate professor of kinesiology Erik Swartz collaborated on the study, which appears in a letter in the New England Journal of Medicine.

Swartz and lead author Steven Broglio of the University of Michigan captured this groundbreaking spinal fracture data while studying concussions. Broglio had fitted the helmets of football players at a high school in the Midwest with padded sensors as part of the Head Impact Telemetry System (HITS), which measures the location and magnitude of impacts to the helmet. During a head-down tackle, an 18-year-old cornerback in the study suffered both a concussion and a fracture of his cervical spine, or neck. (He has since fully recovered.)

"This is really novel," says Swartz, explaining that all previous research on cervical spine injuries have been done on cadavers, animals, or via mathematical modeling. "You can't create a cervical spine fracture in a healthy human, but here you have an actual event where we captured data during an actual cervical spine injury," he says.

Swartz notes that this research will bring real-world information to the study of axial load impact to the head and its effects on the spine. "We now have data that we know caused a serious spine injury in a healthy, 18-year-old strong-bodied athlete," he says.

Swartz, who teaches athletic training, was tapped by Broglio for his expertise in cervical spine injuries in athletes. Swartz helped analyze the acceleration data from the in-helmet sensors in collaboration with sideline video footage of the tackle to describe the effects of the impact to the player.

The authors see far-reaching implications for this work in the quest for greater safety in youth sports. In the journal letter, they note that sports and recreation activities are the second most common cause of cervical spine injuries for people under age 30, with an average lifetime cost of more than $3 million.

While concussions are far more common than broken necks among high school or college athletes, Broglio notes that media attention has been focused on professional sports. "To us, the larger public health issue is with the 1.5 million high school kids that play football each year. Not the 1,500 that play in the NFL," he says.

Swartz adds that this work will inform ongoing discussions about the safety and long-term effects of head-down tackles. "It sends a huge message to the athletic community about head-down impact," he says.

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Sunday, August 21, 2011

Got flow cytometry? All you need is five bucks and a cell phone

ScienceDaily (July 26, 2011) — Flow cytometry, a technique for counting and examining cells, bacteria and other microscopic particles, is used routinely in diagnosing disorders, infections and cancers and evaluating the progression of HIV and AIDS. But flow cytometers are big, bulky contraptions that cost tens of thousands of dollars, making them less than ideal for health care in the field or other settings where resources are limited.See Also:Health & MedicineStem CellsMedical ImagingMatter & EnergyTechnologyBiochemistryComputers & MathMobile ComputingPhotographyStrange ScienceReferenceT cellUser interface designHealth scienceMobile phone radiation and health

Now imagine you could achieve the same results using a device that weighs about half an ounce and costs less than five dollars.

Researchers at the BioPhotonics Laboratory at the UCLA Henry Samueli School of Engineering and Applied Science have developed a compact, lightweight and cost-effective optofluidic platform that integrates imaging cytometry and florescent microscopy and can be attached to a cell phone. The resulting device can be used to rapidly image bodily fluids for cell counts or cell analysis.

The research, which was led by Aydogan Ozcan, a professor of electrical engineering and bioengineering and a member of the California NanoSystems Institute at UCLA, is currently available online in the journal Analytical Chemistry.

"In this work, we developed a cell phone-based imaging cytometry device with a very simple optical design, which is very cost-effective and easy to operate," said Hongying Zhu, a UCLA Engineering postdoctoral scholar at the BioPhotonics Lab and co-author of the research. "It has great potential to be used in resource-limited regions to help people there improve the quality of their health care."

The device is the latest advance by Ozcan's research team, which has developed a number of innovative, scaled-down, cell phone-based technologies that have the potential to transform global health care.

"We have more than 5 billion cell phone subscribers around the world today, and because of this, cell phones can now play a central role in telemedicine applications," Ozcan said. "Our research group has already created a very nice set of tools, including cell phone microscopes, that can potentially replace most of the advanced instruments used currently in laboratories."

How it works

Ozcan's group integrated compact optical attachments to create the optofluidic fluorescent cytometry platform. The platform, which weighs only 18 grams, includes:

1 simple lens (less than $3) 1 plastic color filter (less than $1) 2 LEDs (less than 30 cents each) Simple batteries

The microfluidic assembly is placed just above a separate, inexpensive lens that is put in contact with the cell phone's existing camera unit. This way, the entire cross-section of the microfluidic device can be mapped onto the phone's CMOS sensor-chip. The sample fluid is delivered continuously through a disposable microfluidic channel via a syringe pump.

The device is illuminated from the side by the LEDs using a simple butt-coupling technique. The excitation light is then guided within the cross-section of the device, uniformly exciting the specimens in the imaging fluid. The optofluidic pumping scheme also allows for the use of an inexpensive plastic absorption filter to create the dark-field background needed for fluorescent imaging.

In addition, video post-processing and contour-detection and tracking algorithms are used to count and label the cells or particles passing through the microfluidic chip.

In order to demonstrate proof-of-concept for the new platform, the team used the device to measure the density of white blood cells in human whole-blood samples, as white blood cell density is routinely tested to diagnosis various diseases and infections, including leukemia, HIV and bone marrow deficiencies.

"For the next step, we'd like to explore other potential applications of this device," Zhu said. "For example, we also want to utilize this device to count potential waterborne parasites for water-quality monitoring."

"We'd like to translate our devices for testing in the field and start using them in places they're supposed to be used," Ozcan said. "So I think the next stage for several of our technologies, including this one, is to deploy and test them in extremely poor-resource countries."

This study was funded by the National Institutes of Health, the National Science Foundation, the Office of Naval Research, the Gates Foundation and the Vodafone Americas Foundation.

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Social networking elephants never forget

ScienceDaily (July 26, 2011) — Asian elephants typically live in small, flexible, social groups centered around females and calves while adult males roam independently. However, new research published in BioMed Central's open access journal BMC Ecology shows that while Asian elephants (Elephas maximus) in Sri Lanka may change their day to day associations they maintain a larger, stable, network of friends from which they pick their companions.See Also:Plants & AnimalsAnimalsEvolutionary BiologyBiologyEarth & ClimateEcologyDesertReferencePigeon intelligenceMirror testElephantRichard Leakey

Researchers followed the friendships among over a hundred female adult Asian elephants in the Uda Walawe National Park in Sri Lanka for five seasons and analyzed how these relationships changed over time. While the elephants tended to congregate in groups containing three adult females, there could be as many as 17 in a single group. Social strategies were also variable, with some elephants always being seen in each other's company while others were 'social butterflies' who frequently changed companions. Surprisingly, 16% completely changed their 'top five' friends over the course of the study. Elephants who had few companions were very faithful to them, whereas those who had many tended to be less loyal.

Analysis of elephant 'ego-networks' showed that Asian elephants tended to also associate with larger sets of companions, especially in dry seasons. Social bonds were especially strong when resources were scarce, even to the extent of expelling unfamiliar elephants from sources of water. This may be due in part to the ecology of their environment, because other elephants, which live in drier areas, congregate in greater numbers in wet seasons. It was previously thought that, unlike African savannah elephants, Asian elephants had no extensive social affiliations, but at the population level, extensive clusters of interconnected groups were discovered.

Dr Shermin de Silva from the University of Pennsylvania explained that, "Elephants are able to track one another over large distances by calling to each other and using their sense of smell. So the 'herd' of elephants one sees at any given time is often only a fragment of a much larger social group. Our work shows that they are able recognize their friends and renew these bonds even after being apart for a long time."

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Treating HIV sooner would save South African lives and money

ScienceDaily (July 25, 2011) — If South Africa followed a new World Health Organization recommendation to give antiretroviral therapy to people with HIV when they were still at a higher level of health, it would reduce new infections, lengthen thousands of lives, and recoup the government's investment by 2026, according to new research.See Also:Health & MedicineHIV and AIDSInfectious DiseasesHealth PolicyScience & SocietyPublic HealthFunding PolicyRacial DisparityReferenceAntiretroviral drugHIV testTransmission (medicine)Antiviral drug

If the South African government followed a recent recommendation by the World Health Organization to start antiretroviral therapy (ART) for HIV-infected residents earlier in the progress of the disease, the policy shift would start saving the country money after 16 years and would extend thousands of lives for dozens of years, according to a new study.

In 2009, the WHO recommended that people start ART when a key measure of immune system strength, the CD4

Saturday, August 20, 2011

In pregnancy, diabetes-obesity combo a major red flag

ScienceDaily (July 25, 2011) — Type 2 diabetes and obesity in pregnancy is a daunting duo, according to new research published this month in The Journal of Maternal-Fetal and Neonatal Medicine. The study shows that both conditions independently contribute to higher risks, opening the door to a wide range of pregnancy, delivery and newborn complications.See Also:Health & MedicineDiabetesPregnancy and ChildbirthObesityDiseases and ConditionsPersonalized MedicineChronic IllnessLiving WellReferenceDiabetes mellitus type 2Birth weightStillbirthHyperglycemia

Study authors say the findings are important because obesity and type 2 diabetes are skyrocketing in women of childbearing age. A study in The Journal of the American Medical Association reports that between 2007 and 2008 the prevalence of obesity among adult women in the United States was more than 35 percent. A report from the Centers for Disease Control and Prevention states that approximately 11 percent of women above the age of 20 had diabetes in 2010.

Loralei Thornburg, M.D., senior study author and a high-risk pregnancy expert at the University of Rochester Medical Center, emphasizes that the research is needed now more than ever. "We've never seen the degree of obesity and type 2 diabetes in women that we are seeing right now, because for a very long time diabetes was a disease of an older population, so we rarely dealt with it in prenatal care. We hope this new knowledge will help physicians better understand and care for this rapidly expanding group of high-risk women."

While numerous studies have established that obesity, in the absence of diabetes, is associated with problems in pregnancy -- preterm birth, birth trauma, blood loss and a prolonged hospital stay, to name a few -- less is known about type 2 diabetes and what causes difficulties when the two conditions coexist. Researchers from Rochester wanted to determine if obesity alone accounts for the increased risks in this "dual-diagnosis" group, or if diabetes plays a role as well.

To determine the influence of obesity and type 2 diabetes when the conditions coexist in pregnancy, Thornburg and lead study author Kristin Knight, M.D., used clinical records and the hospital's birth certificate database to identify 213 pairs of women who delivered babies at the Medical Center between 2000 and 2008. Each pair included a diabetic and a non-diabetic patient with approximately the same pre-pregnancy body mass index (BMI). The majority of women in the study were overweight, obese or morbidly obese.

"We matched the pairs pound for pound, because if obesity was the main problem, we'd see similar outcomes between women, whether they had diabetes or not. But if we saw different outcomes between pairs, we'd know the diabetes was impacting outcomes as well," said Thornburg.

Using mathematical models and controlling for outside factors, such as age and tobacco use, researchers found that the patients with type 2 diabetes had overall worse pregnancy, delivery and newborn outcomes than their BMI-matched counterparts. Specifically, diabetic patients had higher rates of preeclampsia, cesarean delivery, shoulder dystocia, preterm delivery, large for gestational age infant, fetal anomaly and admission to the neonatal intensive care unit.

"Women and their physicians need to be aware that each condition on its own increases risk in pregnancy, so when they coexist the situation is even more worrisome," said Knight, a maternal fetal medicine fellow at Rochester. "Pregnancy is a time of great change, and fortunately many women are very open to making modifications during this period in their life. Anything a woman can do to improve her condition, from controlling blood sugar and exercising, to eating nutritious foods and maintaining an optimal weight, will help her deliver a healthier baby."

Knight originally focused her research on the effects of type 1 and type 2 diabetes on pregnancy. In a previous study, she found that women with type 2 diabetes, most of whom were also obese, had poorer outcomes. Consequently, her research turned to obese, type 2 diabetics and their experiences in pregnancy.

"If a woman enters pregnancy obese, but hasn't developed type 2 diabetes, she is in a better place than if she had both," concluded Thornburg.

In addition to Knight and Thornburg, Eva K. Pressman, M.D., and David N. Hackney, M.D., from the Medical Center, also participated in the research.

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